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Papers

Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq BMC Genomics 2012, 13:473 doi:10.1186/1471-2164-13-473Published: 12 September 2012Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-SeqKyung-Do Park, Jongsun Park, Junsu Ko, Byung Chul Kim, Heui-Soo Kim, Kung Ahn, Kyoung-Tag Do, Hansol Choi, Hak-Min Kim, Sanghoon Song, Sunghoon Lee, Sungwoong Jho, Hong-Sik Kong, Young Mok Yang, Byung-Hak Jhun, Chulhong K.. 더보기
GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regionsJunsu Ko, Hahnbeom Park and Chaok SeokBMC Bioinformatics 2012, 13:198 doi:10.1186/1471-2105-13-198 더보기
GalaxyWEB server for protein structure prediction and refinement GalaxyWEB server for protein structure prediction and refinementJunsu Ko, Hahnbeom Park, Lim Heo and Chaok Seok* Nucl. Acids Res. (2012) 40 (W1):W294-W297. doi: 10.1093/nar/gks493Three-dimensional protein structures provide invaluable information for understanding and regulating biological functions of proteins. The GalaxyWEB server predicts protein structure from sequence by template-based mode.. 더보기
The FALC-Loop web server for protein loop modeling Junsu Ko, Dongseon Lee, Hahnbeom Park, Evangelos A. Coutsias, Julian Lee3,* and Chaok Seok1,* Nucl. Acids Res. (2011) doi: 10.1093/nar/gkr352 The FALC-Loop web server provides an online interface for protein loop modeling by employing an ab initio loop modeling method called FALC (fragment assembly and analytical loop closure). The server may be used to construct loop regions in homology modelin.. 더보기
LigDockCSA: protein-ligand docking using conformational space annealing Woong-Hee Shin, Lim Heo, Juyong Lee, Junsu Ko, Chaok Seok, Jooyoung Lee [Journal Link] Abstract Protein–ligand docking techniques are one of the essential tools for structure-based drug design. Two major components of a successful docking program are an efficient search method and an accurate scoring function. In this work, a new docking method called LigDockCSA is developed by using a powerful .. 더보기
A protein domain interaction interface database: InterPare A protein domain interaction interface database: InterPare Sungsam Gong, Changbum Park, Hansol Choi, Junsu Ko, Insoo Jang, Jungsul Lee, Dan M Bolser, Donghoon Oh, Deok-Soo Kim and Jong Bhak BMC Bioinformatics 2005, 6:207 Background Most proteins function by interacting with other molecules. Their interaction interfaces are highly conserved throughout evolution to avoid undesirable interactions t.. 더보기
Protein Motif Extraction via Feature Interval Selection Journal of the Korean Data & Information Science Society 2006, Vol. 17, No 4, pp. 1279-1287 더보기
Refinement of protein termini in template-based modeling using conformational space annealing Hahnbeom Park, Junsu Ko, Keehyoung Joo, Julian Lee, Chaok Seok*, and Jooyoung Lee* Keywords: protein structure prediction protein structure refinement protein terminus modeling CASP fragment assembly Abstract The rapid increase in the number of experimentally determined protein structures in recent years enables us to obtain more reliable protein tertiary structure models than ever by template-b.. 더보기

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